OpenTox Summer School 2022
OpenTox Virtual Summer School
21 July - 4 August 2022
This summer school will be focused on the practical use of in silico tools in predictive toxicology and risk assessment. The materials will be aimed at scientists and practitioners who are not necessarily modelling experts themselves but would like to improve their competency and skills in using tools, models, and data analysis in their work. The school will include an introduction to topics and hands-on group exercises using open science tools supported by our new initiative to deploy OpenTox and related open science resources to the European Open Science Cloud. All activities will be carried out online (virtual meetings, Slack, shared drives, online access to software tools and data, etc.).
Topics:
- QSAR Modelling
- Toxicogenomics Analysis
- Integrated Approaches to Testing and Assessment
- Computational Modelling
- Data Management and Analysis
- Use of New Approach Methods in Risk Assessment
Attendance is limited to the first 50 registrants, you can follow the link below to register now. ***Please note: you must be a current OpenTox Association member to receive complimentary admission to this event.
Summer School Program (all times in CEST)
Topics will include Data Management and Analysis, QSAR modelling, Toxicokinetics, Toxicogenomics, Tox21, IATAs, Use of New Approach Methods in Risk Assessment
Thursday, 21 July
Friday, 22 July
- 13-15: Igor Tetko (Helmholtz Munich and BIGCHEM GmbH), Modelling based on openOCHEM
- 16-18 Agnes L. Karmaus (Integrated Laboratory Systems), Application of Integrated Chemical Environment tools in Predictive Toxicology
Monday, 25 July
Tuesday, 26 July
- 14.00 - 15.30 Wojtek Plonka (Fujitsu), Preprocessing chemical structures for building Structure-Activity Relationship models in Google Colab
- 16.00 - 17.30 Wojtek Plonka (Fujitsu), Building Structure-Activity Relationship models in Google Colab
Wednesday, 27 July
- 14.00 Antreas Afantitis (NovaMechanics), Applications and Exercises in Image Analysis and Chem/Nano informatics Applications using Enalos Tools
- 16.00 - 18.00 Harvey Clewell (Ramboll), Open source toxicokinetic modeling resources - review and application
- 18.00 -19.00 Igor Tetko (Helmholtz Munich and BIGCHEM GmbH), Exercise review: Modelling based on openOCHEM
Thursday, 28 July
- 13.00-14:30 Kabiruddin Khan and Pranika Singh (Edelweiss Connect), Data analysis of in vitro assay and omics data
- 14.30 - 16.00 Hyun Kil Shin (Korea Institute of Toxicology), Preparation, Conversion, and Use of Chemical Structures supporting Search and Modelling in Python
- 16.00-18:00 Tomaz Mohoric (Edelweiss Connect), IATAs: theory and practice on building predictive models
Friday, 29 July
Wednesday, 3 Aug
Thursday, 4 Aug